Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12588728 chr14:39749015 A/G LOC647288 chr13:75811890-75814517:- -0.39 -6.24 1.17E-9 Box Plot
BLCA rs12614783 chr2:18077188 A/G FGF4 chr11:69585784-69590171:- 0.41 6.78 4.46E-11 Box Plot
BLCA rs12618862 chr2:101181836 C/A LOC285359 chr3:101431278-101432259:+ 0.47 9.21 2.1E-18 Box Plot
BLCA rs12622226 chr2:101181889 A/G LOC285359 chr3:101431278-101432259:+ 0.47 9.13 3.86E-18 Box Plot
BLCA rs12625066 chr20:58982254 C/T ATP5EP2 chr13:28519343-28519727:+ -0.35 -6.05 3.5E-9 Box Plot
BLCA rs12625066 chr20:58982254 C/T POU2F1 chr1:167190066-167396582:+ -0.39 -6.11 2.47E-9 Box Plot
BLCA rs12627958 chr22:23982775 C/T IGLL3 chr22:25713888-25716191:+ 0.43 6.15 1.96E-9 Box Plot
BLCA rs12630748 chr3:72745082 C/T PSMD6 chr3:63996225-64009686:- -0.78 -5.96 5.7E-9 Box Plot
BLCA rs12630748 chr3:72745082 C/T UBA3 chr3:69103881-69129559:- -0.88 -6.56 1.77E-10 Box Plot
BLCA rs12658510 chr5:176605273 G/A LOC388955 chr2:63849182-63850159:- -0.74 -14.08 1.38E-36 Box Plot
BLCA rs12659148 chr5:72671738 G/T FLJ44635 chrX:71364034-71381599:+ 0.38 6.08 2.96E-9 Box Plot
BLCA rs12659737 chr5:176742506 T/C LOC388955 chr2:63849182-63850159:- 0.53 10.05 3.11E-21 Box Plot
BLCA rs12660023 chr5:176700885 G/A LOC388955 chr2:63849182-63850159:- 0.51 11.42 3.47E-26 Box Plot
BLCA rs12666544 chr7:40846091 T/C FAM175A chr4:84380670-84444501:- -0.33 -5.96 5.88E-9 Box Plot
BLCA rs12676884 chr8:13848568 A/C BTNL3 chr5:180415845-180433727:+ 0.32 6 4.5E-9 Box Plot